PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT29878
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family BES1
Protein Properties Length: 355aa    MW: 37495.3 Da    PI: 8.0398
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT29878genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822185.81.7e-572416112147
    DUF822  12 rEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssasaspesslqsslkssalaspvesys 111
               rEnn+rRERrRRaiaakiy+GLRa+Gny+lpk++DnneVlkALc+eAGwvve+DGttyr+g+kp+ ++     +sasasp+ss+q        +sp++sy+
  EMT29878  24 RENNRRRERRRRAIAAKIYTGLRAYGNYNLPKHCDNNEVLKALCNEAGWVVEPDGTTYRRGCKPPpQARTDPMRSASASPCSSYQ--------PSPRASYN 116
               9****************************************************************88889999************........******** PP

    DUF822 112 aspksssfpspssldsislasa.........asllpvlsvlslvs 147
               +sp+sssfps+ s+++i+l            +sl+p+l++ls+ +
  EMT29878 117 PSPASSSFPSSGSSSHITLGGGnnfiggvegSSLIPWLKNLSSNP 161
               *****************9987678999999999999999998744 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.7E-6224158IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MADPAAGAGG AERERRAGGR HGLRENNRRR ERRRRAIAAK IYTGLRAYGN YNLPKHCDNN  60
EVLKALCNEA GWVVEPDGTT YRRGCKPPPQ ARTDPMRSAS ASPCSSYQPS PRASYNPSPA  120
SSSFPSSGSS SHITLGGGNN FIGGVEGSSL IPWLKNLSSN PSFASSSKLP QLHHLYFNGG  180
SISAPVTPPS SSPTHTPRMK TDWESQCVLP PWAGANYASL PNSTPPSPGH HVAPDPAWLA  240
GFQISSAGPS SPTYNLVSHN PFGIALASSS RVCTPGQSGT CSPAMGDHAP AHHDVQMEMV  300
EGAADDFAFG SNSNGNNGSP GLVKAWEGER IHEECASDEL ELTLGSSRTR GEPPF
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3601810.0AK360181.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1112F17.
GenBankAK3667940.0AK366794.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2046O02.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003563774.10.0PREDICTED: protein BZR1 homolog 3
SwissprotQ5Z9E51e-174BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBLM8C7510.0M8C751_AEGTA; Uncharacterized protein
STRINGMLOC_6679.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP136638112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.14e-68BES1/BZR1 homolog 4